Interdisciplinary PhD in Molecular Biosciences

Dr. Mohamed (Moh) Salem - Publications

Salem, M., Kenney, P., Killefer, J., Nath, J. (2004). Isolation and in vitro characterization of the calpains from rainbow trout (Oncorhynchus mykiss) muscle and their role in texture development, J. Muscle foods, 15: 245-255.

Salem, M., Nath, J., Killefer, J. (2004). Cloning of the calpain regulatory subunit cDNA from fish reveals a divergent domain-V, Anim Biotechnol, 15(2): 145-57.

Salem, M., Nath, J., Rexroad, C. E., 3rd, Killefer, J., Yao, J. (2005). Identification and molecular characterization of the rainbow trout calpains (Capn1 and Capn2): their expression in muscle wasting during starvation, Comp Biochem Physiol B Biochem Mol Biol, 140(1): 63-71.

Salem, M., Rexroad, C. E., 3rd, Yao, J. (2005). Identification of a novel gill-specific calpain from rainbow trout (Oncorhynchus mykiss), Fish Physiol Biochem, 32: 1-6.

Salem, M., Yao, J., Rexroad, C. E., 3rd, Kenney, P. B., Semmens, K., Killefer, J., Nath, J. (2005). Characterization of calpastatin gene in fish: its potential role in muscle growth and fillet quality, Comp Biochem Physiol B Biochem Mol Biol, 141(4): 488-97.

Salem, M., Kenney, P.B., Rexroad, C. E., 3rd, Yao, J. (2006). Molecular characterization of muscle atrophy and proteolysis associated with spawning in rainbow trout, Comp Biochem Physiol D Genomics Proteomics, 1(2): 227-237.

Salem, M., Kenney, P. B., Rexroad, C. E., 3rd, Yao, J. (2006). Microarray gene expression analysis in atrophying rainbow trout muscle: a unique nonmammalian muscle degradation model, Physiol Genomics, 28(1): 33-45.

Salem, M., Levesque, H., Moon, T. W., Rexroad, C. E., 3rd, Yao, J. (2006). Anabolic effects of feeding beta2-adrenergic agonists on rainbow trout muscle proteases and proteins. Comp Biochem Physiol A Mol Integr Physiol, 144(2): 145-54.

Salem, M., Silverstein, J., Rexroad, C. E., 3rd, Yao, J. (2007). Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss), BMC Genomics, 8: 328.

Bettegowda, A., Patel, O.V., Lee, K. B., Park, K. E., Salem, M., Yao, J., Ireland, J. J., Smith, G. W. (2008). Identification of novel bovine cumulus cell molecular markers predictive of oocyte competence: functional and diagnostic implications, Biol Reprod, 79: 301–309.

Ramachandra, R. K., Salem, M., Gahr, S., Rexroad, C. E., 3rd, Yao, J. (2008). Cloning and characterization of microRNAs from rainbow trout (Oncorhynchus mykiss): their expression during early embryonic development, BMC Dev Biol, 8: 41.

Salem, M., Kenney, P.B., Rexroad, C. E., 3rd, Yao J. (2008). Development of a 37K high-density oligonucleotide microarray: A new tool for functional genome research in rainbow trout, J Fish Biol, 72:2187-2206.

Goravanahally, M. P., Salem, M., Yao, J., Inskeep, K., Flores, J.A. (2009). Identification of differential gene expression during transition of bovine corpus luteum from early to mid–phase and their potential role in acquisition of luteolytic sensitivity to prostaglandin f2 alpha., Biol Reprod, 80(5):980-988.

Sanchez, C., Smith, T., Wiedmann, R., Vallejo, R., Salem, M., Yao J., Rexroad, C. E., 3rd. (2009). Single Nucleotide Polymorphism discovery in Rainbow Trout by deep sequencing of a reduced representation library, BMC Genomics, 10:559.

Aussanasuwannakul, A., Kenney, P.B., Brannan, R.G., Slider, S.D., Salem, M., Yao, J. (2010). Relating Instrumental Texture, Determined by Variable-Blade and Allo- Kramer Shear Attachments, to Sensory Analysis of Rainbow Trout, Oncorhynchus mykiss, Fillets, J Food Sci, 75(7): S365-S374 (10).

Salem, M., Kenney, P.B., Rexroad, C. E. 3rd, Yao, J. (2010). Proteomic signature of muscle atrophy in rainbow trout, J Proteomics, 73: 778-789.

Salem, M., Rexroad, C. E., 3rd, Thorgaard, G.H., Yao, J. (2010) Characterization of the rainbow trout transcriptome using Sanger and 454-Pyrosequencing approaches, BMC Genomics, 11:564.

Salem M, Xiao, C., Womack, J., Rexroad, C. E. 3rd, Yao, J. (2010). MicroRNA repertoire for functional genome research in rainbow trout (Oncorhynchus mykiss), Marine Biotech, 12(4):410-29.

Tripuran, S., Xiao, C., Salem, M., Yao, J. (2010). Cloning and Expression Profiling of Fetal Ovary-Expressed microRNAs in Cattle, Anim Reprod Sci, 120: 16-22.

Wang, J., Salem, M., Kenney, P.B., Rexroad, C. E., 3rd, Yao, J. (2010). Molecular characterization of the MuRF genes in rainbow trout: potential role in muscle degradation, Comp Biochem Physiol, 158(3):208-15.

Aussanasuwannakul, A., Kenney, P.B., Slider, S.D., Yao, J., Manor M., Weber, G., Salem, M. (2011). Effect of sexual maturation on growth, fillet composition, and texture of female rainbow trout (Oncorhynchus mykiss) on a high nutritional plane, Aquaculture 317 (1-4), 79-88.

Salem M: Next generation sequencing and functional analysis in rainbow trout. In: Functional Genomics in Aquaculture. Edited by Saroglia M, Liu Z: Wiley Blackwell; (2012).